7KEK image
Deposition Date 2020-10-11
Release Date 2021-09-29
Last Version Date 2024-10-16
Entry Detail
PDB ID:
7KEK
Keywords:
Title:
Structure of the free outer-arm dynein in pre-parallel state
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
8.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein alpha heavy chain
Gene (Uniprot):TTHERM_01276420
Chain IDs:A
Chain Length:4620
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein beta heavy chain
Gene (Uniprot):TTHERM_00499300
Chain IDs:D (auth: B)
Chain Length:4595
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein gamma heavy chain
Gene (Uniprot):TTHERM_00486600
Chain IDs:B (auth: C)
Chain Length:4168
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein intermediate chain DIC2
Gene (Uniprot):TTHERM_00487150
Chain IDs:L (auth: D)
Chain Length:667
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein intermediate chain DIC3
Gene (Uniprot):TTHERM_00079230
Chain IDs:K (auth: E)
Chain Length:670
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain roadblock LC7A
Gene (Uniprot):TTHERM_00348650
Chain IDs:H (auth: F)
Chain Length:133
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain roadblock LC7B
Gene (Uniprot):TTHERM_00030210
Chain IDs:G
Chain Length:159
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain LC8_1b (DLC82)
Chain IDs:F (auth: H)
Chain Length:92
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain LC8_1a (LC10)
Chain IDs:E (auth: I)
Chain Length:110
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain LC8_2b
Gene (Uniprot):TTHERM_00023950
Chain IDs:P (auth: J)
Chain Length:111
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain LC8_2a (LC8E)
Chain IDs:O (auth: K)
Chain Length:93
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain LC8_3b
Gene (Uniprot):TTHERM_000442909
Chain IDs:N (auth: L)
Chain Length:111
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain LC8_3a
Chain IDs:Q (auth: M)
Chain Length:87
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain Tctex_b
Gene (Uniprot):TTHERM_00392979
Chain IDs:I (auth: N)
Chain Length:117
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain Tctex_a (LC2A)
Chain IDs:J (auth: O)
Chain Length:132
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Thioredoxin LC3BL
Gene (Uniprot):TTHERM_00149859
Chain IDs:M (auth: P)
Chain Length:122
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein light chain 1
Chain IDs:C (auth: Q)
Chain Length:202
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Primary Citation
Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism.
Nat.Struct.Mol.Biol. 28 799 810 (2021)
PMID: 34556869 DOI: 10.1038/s41594-021-00656-9

Abstact

Thousands of outer-arm dyneins (OADs) are arrayed in the axoneme to drive a rhythmic ciliary beat. Coordination among multiple OADs is essential for generating mechanical forces to bend microtubule doublets (MTDs). Using electron microscopy, we determined high-resolution structures of Tetrahymena thermophila OAD arrays bound to MTDs in two different states. OAD preferentially binds to MTD protofilaments with a pattern resembling the native tracks for its distinct microtubule-binding domains. Upon MTD binding, free OADs are induced to adopt a stable parallel conformation, primed for array formation. Extensive tail-to-head (TTH) interactions between OADs are observed, which need to be broken for ATP turnover by the dynein motor. We propose that OADs in an array sequentially hydrolyze ATP to slide the MTDs. ATP hydrolysis in turn relaxes the TTH interfaces to effect free nucleotide cycles of downstream OADs. These findings lead to a model explaining how conformational changes in the axoneme produce coordinated action of dyneins.

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