7KDE image
Deposition Date 2020-10-08
Release Date 2020-10-28
Last Version Date 2024-10-30
Entry Detail
PDB ID:
7KDE
Title:
BG505 SOSIP.664 in complex with the V3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8ANC195
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.55 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp41
Gene (Uniprot):env
Chain IDs:A, B, C
Chain Length:153
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein gp120
Gene (Uniprot):env
Chain IDs:D (auth: E), E (auth: F), F (auth: G)
Chain Length:479
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Polymer Type:polypeptide(L)
Molecule:Ab 1485 Heavy Chain
Chain IDs:G (auth: H), H (auth: J), I (auth: M)
Chain Length:233
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Ab 1485 Light Chain
Chain IDs:P (auth: I), Q (auth: L), R (auth: N)
Chain Length:216
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:8ANC195 Fab Heavy Chain
Chain IDs:J (auth: O), L (auth: Q), N (auth: S)
Chain Length:244
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:8ANC195 Fab Light Chain
Chain IDs:K (auth: P), M (auth: R), O (auth: T)
Chain Length:215
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
A broadly neutralizing macaque monoclonal antibody against the HIV-1 V3-Glycan patch.
Elife 9 ? ? (2020)
PMID: 33084569 DOI: 10.7554/eLife.61991

Abstact

A small fraction of HIV-1- infected humans develop broadly neutralizing antibodies (bNAbs) against HIV-1 that protect macaques from simian immunodeficiency HIV chimeric virus (SHIV). Similarly, a small number of macaques infected with SHIVs develop broadly neutralizing serologic activity, but less is known about the nature of simian antibodies. Here, we report on a monoclonal antibody, Ab1485, isolated from a macaque infected with SHIVAD8 that developed broadly neutralizing serologic activity targeting the V3-glycan region of HIV-1 Env. Ab1485 neutralizes 38.1% of HIV-1 isolates in a 42-pseudovirus panel with a geometric mean IC50 of 0.055 µg/mLl and SHIVAD8 with an IC50 of 0.028 µg/mLl. Ab1485 binds the V3-glycan epitope in a glycan-dependent manner. A 3.5 Å cryo-electron microscopy structure of Ab1485 in complex with a native-like SOSIP Env trimer showed conserved contacts with the N332gp120 glycan and gp120 GDIR peptide motif, but in a distinct Env-binding orientation relative to human V3/N332gp120 glycan-targeting bNAbs. Intravenous infusion of Ab1485 protected macaques from a high dose challenge with SHIVAD8. We conclude that macaques can develop bNAbs against the V3-glycan patch that resemble human V3-glycan bNAbs.

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Primary Citation of related structures