7K65 image
Deposition Date 2020-09-18
Release Date 2021-03-17
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7K65
Title:
Hedgehog receptor Patched (PTCH1) in complex with conformation selective nanobody TI23
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Lama glama (Taxon ID: 9844)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein patched homolog 1
Gene (Uniprot):Ptch1
Chain IDs:A
Chain Length:1281
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:nanobody TI23
Chain IDs:B
Chain Length:124
Number of Molecules:1
Biological Source:Lama glama
Primary Citation
Hedgehog pathway activation through nanobody-mediated conformational blockade of the Patched sterol conduit.
Proc.Natl.Acad.Sci.USA 117 28838 28846 (2020)
PMID: 33139559 DOI: 10.1073/pnas.2011560117

Abstact

Activation of the Hedgehog pathway may have therapeutic value for improved bone healing, taste receptor cell regeneration, and alleviation of colitis or other conditions. Systemic pathway activation, however, may be detrimental, and agents amenable to tissue targeting for therapeutic application have been lacking. We have developed an agonist, a conformation-specific nanobody against the Hedgehog receptor Patched1 (PTCH1). This nanobody potently activates the Hedgehog pathway in vitro and in vivo by stabilizing an alternative conformation of a Patched1 "switch helix," as revealed by our cryogenic electron microscopy structure. Nanobody-binding likely traps Patched in one stage of its transport cycle, thus preventing substrate movement through the Patched1 sterol conduit. Unlike the native Hedgehog ligand, this nanobody does not require lipid modifications for its activity, facilitating mechanistic studies of Hedgehog pathway activation and the engineering of pathway activating agents for therapeutic use. Our conformation-selective nanobody approach may be generally applicable to the study of other PTCH1 homologs.

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Primary Citation of related structures
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