7K5B image
Entry Detail
PDB ID:
7K5B
EMDB ID:
Keywords:
Title:
Structure of outer-arm dynein bound to microtubule doublet in microtubule binding state 2 (MTBS-2)
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2020-09-16
Release Date:
2021-09-29
Method Details:
Experimental Method:
Resolution:
4.50 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Dynein heavy chain, outer arm protein
Chain IDs:A
Chain Length:4615
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Outer arm dynein beta heavy chain
Chain IDs:B
Chain Length:4588
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:gamma heavy chain
Chain IDs:C
Chain Length:3947
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein intermediate chain 2
Chain IDs:D
Chain Length:595
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Flagellar outer dynein arm intermediate protein, putative
Chain IDs:E
Chain Length:557
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain roadblock-type 2 protein
Chain IDs:F
Chain Length:128
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain roadblock-type 2 protein
Chain IDs:G
Chain Length:151
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain
Chain IDs:H
Chain Length:91
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain
Chain IDs:I
Chain Length:106
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain
Chain IDs:J
Chain Length:95
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain
Chain IDs:K
Chain Length:90
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain
Chain IDs:L
Chain Length:111
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain
Chain IDs:M
Chain Length:87
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain tctex-type 1 protein
Chain IDs:N
Chain Length:114
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain 2A
Chain IDs:O
Chain Length:120
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Thioredoxin
Chain IDs:P
Chain Length:112
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain 1
Chain IDs:Q
Chain Length:192
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Polymer Type:polypeptide(L)
Description:Dynein light chain 4A
Chain IDs:R
Chain Length:150
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Primary Citation
Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism.
Nat.Struct.Mol.Biol. 28 799 810 (2021)
PMID: 34556869 DOI: 10.1038/s41594-021-00656-9

Abstact

Thousands of outer-arm dyneins (OADs) are arrayed in the axoneme to drive a rhythmic ciliary beat. Coordination among multiple OADs is essential for generating mechanical forces to bend microtubule doublets (MTDs). Using electron microscopy, we determined high-resolution structures of Tetrahymena thermophila OAD arrays bound to MTDs in two different states. OAD preferentially binds to MTD protofilaments with a pattern resembling the native tracks for its distinct microtubule-binding domains. Upon MTD binding, free OADs are induced to adopt a stable parallel conformation, primed for array formation. Extensive tail-to-head (TTH) interactions between OADs are observed, which need to be broken for ATP turnover by the dynein motor. We propose that OADs in an array sequentially hydrolyze ATP to slide the MTDs. ATP hydrolysis in turn relaxes the TTH interfaces to effect free nucleotide cycles of downstream OADs. These findings lead to a model explaining how conformational changes in the axoneme produce coordinated action of dyneins.

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