7K1M image
Entry Detail
PDB ID:
7K1M
Title:
Peptide from stony coral Heliofungia actiniformis: Hact-1
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2020-09-08
Release Date:
2020-11-25
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:GLY-CYS-HIS-TYR-THR-PRO-PHE-GLY-LEU-ILE-CYS-PHE peptide
Chain IDs:A
Chain Length:12
Number of Molecules:1
Biological Source:Heliofungia actiniformis
Ligand Molecules
Primary Citation
Identification and Characterization of a Peptide from the Stony Coral Heliofungia actiniformis .
J.Nat.Prod. 83 3454 3463 (2020)
PMID: 33166137 DOI: 10.1021/acs.jnatprod.0c00981

Abstact

Marine organisms produce a diverse range of toxins and bioactive peptides to support predation, competition, and defense. The peptide repertoires of stony corals (order Scleractinia) remain relatively understudied despite the presence of tentacles used for predation and defense that are likely to contain a range of bioactive compounds. Here, we show that a tentacle extract from the mushroom coral, Heliofungia actiniformis, contains numerous peptides with a range of molecular weights analogous to venom profiles from species such as cone snails. Using NMR spectroscopy and mass spectrometry we characterized a 12-residue peptide (Hact-1) with a new sequence (GCHYTPFGLICF) and well-defined β-hairpin structure stabilized by a single disulfide bond. The sequence is encoded within the genome of the coral and expressed in the polyp body tissue. The structure present is common among toxins and venom peptides, but Hact-1 does not show activity against select examples of Gram-positive and Gram-negative bacteria or a range of ion channels, common properties of such peptides. Instead, it appears to have a limited effect on human peripheral blood mononuclear cells, but the ecological function of the peptide remains unknown. The discovery of this peptide from H. actiniformis is likely to be the first of many from this and related species.

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Primary Citation of related structures