7JU4 image
Deposition Date 2020-08-19
Release Date 2020-12-16
Last Version Date 2024-03-06
Entry Detail
PDB ID:
7JU4
Title:
Radial spoke 2 stalk, IDAc, and N-DRC attached with doublet microtubule
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein regulatory complex subunit 4
Gene (Uniprot):DRC4
Chain IDs:A (auth: 0), E (auth: 4)
Chain Length:471
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein regulatory complex protein 1
Gene (Uniprot):DRC1
Chain IDs:B (auth: 1)
Chain Length:698
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein regulatory complex subunit 2
Gene (Uniprot):DRC2
Chain IDs:C (auth: 2)
Chain Length:573
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Unknown protein
Chain IDs:D (auth: 3)
Chain Length:72
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tubulin beta
Gene (Uniprot):TUBB1, TUBB2
Chain IDs:F (auth: 6), H (auth: 8), L (auth: C), P (auth: G), R (auth: I), T (auth: K), X (auth: O), Z (auth: Q), BA (auth: S), FA (auth: W), HA (auth: Y), RA (auth: i), TA (auth: k), HB (auth: y)
Chain Length:443
Number of Molecules:14
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tubulin alpha
Gene (Uniprot):TUBA1
Chain IDs:G (auth: 7), I (auth: 9), M (auth: D), Q (auth: H), S (auth: J), U (auth: L), Y (auth: P), AA (auth: R), CA (auth: T), GA (auth: X), IA (auth: Z), SA (auth: j), CB (auth: t), IB (auth: z)
Chain Length:451
Number of Molecules:14
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar-associated protein 59
Gene (Uniprot):FAP59
Chain IDs:J (auth: A)
Chain Length:925
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar-associated protein 172
Gene (Uniprot):FAP172
Chain IDs:K (auth: B)
Chain Length:904
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Radial spoke protein 3
Gene (Uniprot):CHLRE_06g291700v5
Chain IDs:N (auth: E), O (auth: F)
Chain Length:91
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Radial spoke protein 7
Gene (Uniprot):CHLRE_07g347050v5
Chain IDs:V (auth: M), W (auth: N)
Chain Length:256
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Radial spoke protein 11
Gene (Uniprot):PF25
Chain IDs:DA (auth: U), EA (auth: V)
Chain Length:377
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein 8 kDa light chain, flagellar outer arm
Chain IDs:JA (auth: a), KA (auth: b), LA (auth: c), MA (auth: d), NA (auth: e), OA (auth: f), PA (auth: g), QA (auth: h), XA (auth: o), YA (auth: p), ZA (auth: q), AB (auth: r)
Chain Length:925
Number of Molecules:12
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Radial spoke protein 15
Gene (Uniprot):CHLRE_09g397993v5
Chain IDs:UA (auth: l)
Chain Length:451
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FAP207
Gene (Uniprot):CHLRE_07g328350v5
Chain IDs:VA (auth: m)
Chain Length:256
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Radial spike protein 8
Gene (Uniprot):RSP8
Chain IDs:WA (auth: n)
Chain Length:378
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FAP253
Gene (Uniprot):CHLRE_12g502000v5
Chain IDs:BB (auth: s)
Chain Length:443
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Actin
Chain IDs:DB (auth: u)
Chain Length:377
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:28 kDa inner dynein arm light chain, axonemal
Gene (Uniprot):IDA4
Chain IDs:EB (auth: v), FB (auth: w)
Chain Length:253
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CFAP91 domain-containing protein
Gene (Uniprot):CHLRE_07g330700v5
Chain IDs:GB (auth: x)
Chain Length:1298
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Primary Citation
Structures of radial spokes and associated complexes important for ciliary motility.
Nat.Struct.Mol.Biol. 28 29 37 (2021)
PMID: 33318703 DOI: 10.1038/s41594-020-00530-0

Abstact

In motile cilia, a mechanoregulatory network is responsible for converting the action of thousands of dynein motors bound to doublet microtubules into a single propulsive waveform. Here, we use two complementary cryo-EM strategies to determine structures of the major mechanoregulators that bind ciliary doublet microtubules in Chlamydomonas reinhardtii. We determine structures of isolated radial spoke RS1 and the microtubule-bound RS1, RS2 and the nexin-dynein regulatory complex (N-DRC). From these structures, we identify and build atomic models for 30 proteins, including 23 radial-spoke subunits. We reveal how mechanoregulatory complexes dock to doublet microtubules with regular 96-nm periodicity and communicate with one another. Additionally, we observe a direct and dynamically coupled association between RS2 and the dynein motor inner dynein arm subform c (IDAc), providing a molecular basis for the control of motor activity by mechanical signals. These structures advance our understanding of the role of mechanoregulation in defining the ciliary waveform.

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