7JTK image
Deposition Date 2020-08-17
Release Date 2020-12-16
Last Version Date 2024-11-13
Entry Detail
PDB ID:
7JTK
Title:
Radial spoke 1 isolated from Chlamydomonas reinhardtii
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 1
Gene (Uniprot):RSP1
Chain IDs:A, B
Chain Length:814
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 2
Gene (Uniprot):RSP2
Chain IDs:C, D
Chain Length:738
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 3
Chain IDs:E, F
Chain Length:516
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 4
Chain IDs:G, H
Chain Length:465
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 5
Gene (Uniprot):RSP5
Chain IDs:I, J
Chain Length:586
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 6
Gene (Uniprot):RSP6
Chain IDs:K, L
Chain Length:459
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 7
Gene (Uniprot):CHLRE_07g347050v5
Chain IDs:M, N
Chain Length:500
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 9
Gene (Uniprot):RSP9
Chain IDs:O, P, Q, R
Chain Length:269
Number of Molecules:4
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 10
Gene (Uniprot):RSP10
Chain IDs:S, T
Chain Length:216
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 11
Gene (Uniprot):PF25
Chain IDs:U, V
Chain Length:70
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 12
Gene (Uniprot):CHLRE_02g114700v5
Chain IDs:W
Chain Length:181
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 14
Gene (Uniprot):RSP14
Chain IDs:X
Chain Length:387
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 16
Gene (Uniprot):CHLRE_12g511050v5
Chain IDs:Y, Z, LA (auth: y), MA (auth: z)
Chain Length:346
Number of Molecules:4
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein 8 kDa light chain, flagellar outer arm
Chain IDs:AA (auth: a), BA (auth: b), CA (auth: c), DA (auth: d)
Chain Length:814
Number of Molecules:4
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Unknown protein
Chain IDs:EA (auth: e)
Chain Length:516
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar radial spoke protein 23
Gene (Uniprot):CHLRE_16g654300v5
Chain IDs:FA (auth: i), GA (auth: j)
Chain Length:586
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome b5 heme-binding domain-containing protein
Gene (Uniprot):CHLRE_09g403200v5
Chain IDs:HA (auth: k)
Chain Length:459
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Uncharacterized protein
Gene (Uniprot):CHLRE_12g502000v5
Chain IDs:IA (auth: s)
Chain Length:216
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Predicted protein
Gene (Uniprot):CHLRE_12g495550v5
Chain IDs:JA (auth: u), KA (auth: v)
Chain Length:70
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Ligand Molecules
Primary Citation
Structures of radial spokes and associated complexes important for ciliary motility.
Nat.Struct.Mol.Biol. 28 29 37 (2021)
PMID: 33318703 DOI: 10.1038/s41594-020-00530-0

Abstact

In motile cilia, a mechanoregulatory network is responsible for converting the action of thousands of dynein motors bound to doublet microtubules into a single propulsive waveform. Here, we use two complementary cryo-EM strategies to determine structures of the major mechanoregulators that bind ciliary doublet microtubules in Chlamydomonas reinhardtii. We determine structures of isolated radial spoke RS1 and the microtubule-bound RS1, RS2 and the nexin-dynein regulatory complex (N-DRC). From these structures, we identify and build atomic models for 30 proteins, including 23 radial-spoke subunits. We reveal how mechanoregulatory complexes dock to doublet microtubules with regular 96-nm periodicity and communicate with one another. Additionally, we observe a direct and dynamically coupled association between RS2 and the dynein motor inner dynein arm subform c (IDAc), providing a molecular basis for the control of motor activity by mechanical signals. These structures advance our understanding of the role of mechanoregulation in defining the ciliary waveform.

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Primary Citation of related structures
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