7JSN image
Deposition Date 2020-08-15
Release Date 2020-10-21
Last Version Date 2025-05-14
Entry Detail
PDB ID:
7JSN
Title:
Structure of the Visual Signaling Complex between Transducin and Phosphodiesterase 6
Biological Source:
Source Organism:
Bos taurus (Taxon ID: 9913)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha
Gene (Uniprot):PDE6A
Chain IDs:A
Chain Length:859
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta
Gene (Uniprot):PDE6B
Chain IDs:B
Chain Length:853
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma
Gene (Uniprot):PDE6G
Chain IDs:E (auth: C), F (auth: D)
Chain Length:87
Number of Molecules:2
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(t) subunit alpha-1, Guanine nucleotide-binding protein G(i) subunit alpha-1 chimera
Gene (Uniprot):GNAT1
Mutations:R174C,Q200L
Chain IDs:C (auth: E), D (auth: F)
Chain Length:371
Number of Molecules:2
Biological Source:Bos taurus
Primary Citation
Structure of the Visual Signaling Complex between Transducin and Phosphodiesterase 6.
Mol.Cell 80 237 ? (2020)
PMID: 33007200 DOI: 10.1016/j.molcel.2020.09.013

Abstact

Heterotrimeric G proteins communicate signals from activated G protein-coupled receptors to downstream effector proteins. In the phototransduction pathway responsible for vertebrate vision, the G protein-effector complex is composed of the GTP-bound transducin α subunit (GαT·GTP) and the cyclic GMP (cGMP) phosphodiesterase 6 (PDE6), which stimulates cGMP hydrolysis, leading to hyperpolarization of the photoreceptor cell. Here we report a cryo-electron microscopy (cryoEM) structure of PDE6 complexed to GTP-bound GαT. The structure reveals two GαT·GTP subunits engaging the PDE6 hetero-tetramer at both the PDE6 catalytic core and the PDEγ subunits, driving extensive rearrangements to relieve all inhibitory constraints on enzyme catalysis. Analysis of the conformational ensemble in the cryoEM data highlights the dynamic nature of the contacts between the two GαT·GTP subunits and PDE6 that supports an alternating-site catalytic mechanism.

Legend

Protein

Chemical

Disease

Primary Citation of related structures