ISDA: 7JR8

Deposition Date 2020-08-11

Release Date 2021-05-26

Last Version Date 2024-03-06

Entry Detail

PDB ID:

7JR8

Keywords:

Isomerase, Transferase/Inhibitor

Title:

H-PDGS complexed with a 2-phenylimidazo[1,2-a]pyridine-6-carboxamide inhibitors

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.13 Å

R-Value Free:

0.14

R-Value Work:

0.11

R-Value Observed:

0.11

Space Group:

P 1 21 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Hematopoietic prostaglandin D synthase
Gene (Uniprot):HPGDS
Chain IDs:A, B
Chain Length:200
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:O60760 Pfam ID:PF02798, PF14497 EC:2.5.1.18

Ligand Molecules

EDO

GSH

VH7

Primary Citation

A knowledge-based, structural-aided discovery of a novel class of 2-phenylimidazo[1,2-a]pyridine-6-carboxamide H-PGDS inhibitors.

Schulte, C.A, Deaton, D.N, Diaz, E, Do, Y, Gampe, R.T, Guss, J.H, Hancock, A.P, Hobbs, H, Hodgson, S.T, Holt, J, Jeune, M.R, Kahler, K.M, Kramer, H.F, Le, J, Mortenson, P.N, Musetti, C, Nolte, R.T, Orband-Miller, L.A, Peckham, G.E, Petrov, K.G, Pietrak, B.L, Poole, C, Price, D.J, Saxty, G, Shillings, A, Smalley Jr, T.L, Somers, D.O, Stewart, E.L, Stuart, J.D, Thomson, S.A.Show

Bioorg.Med.Chem.Lett. 47 128113 128113 (2021)

PMID: 33991628 DOI: 10.1016/j.bmcl.2021.128113

Abstact

Through an internal virtual screen at GlaxoSmithKline a distinct class of 2-phenylimidazo[1,2-a]pyridine-6-carboxamide H-PGDS inhibitors were discovered. Careful evaluation of crystal structures and SAR led to a novel, potent, and orally active imidazopyridine inhibitor of H-PGDS, 20b. Herein, describes the identification of 2 classes of inhibitors, their syntheses, and their challenges.

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Protein

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Primary Citation of related structures

Abstact

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