ISDA

Deposition Date 2020-08-08

Release Date 2021-06-16

Last Version Date 2023-10-18

Entry Detail

PDB ID:

7JPJ

Keywords:

LYASE

Title:

Crystal Structure of the essential dimeric LYSA from Phaeodactylum tricornutum

Biological Source:

Source Organism:

Phaeodactylum tricornutum (Taxon ID: 556484)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.78 Å

R-Value Free:

0.24

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Diaminopimelate decarboxylase
Gene (Uniprot):PHATRDRAFT_21592
Chain IDs:A, B
Chain Length:441
Number of Molecules:2
Biological Source:Phaeodactylum tricornutum

UniProt ID:B7G3A2 Pfam ID:PF00278, PF02784

Ligand Molecules

DLY

SO4

Primary Citation

The Phaeodactylum tricornutum diaminopimelate decarboxylase was acquired via horizontal gene transfer from bacteria and displays substrate promiscuity

Bielinski, V.A, Brunson, J.K, Ghosh, A, Moosburner, M.A, Garza, E.A, Fussy, Z, Bai, J, McKinnie, S.M.K, Moore, B.S, Allen, A.E, Almo, S.C, Dupont, C.L.Show

Biorxiv ? ? ? (2020)

DOI: 10.1101/2020.10.01.322594

Primary Citation of related structures