7JPI image
Deposition Date 2020-08-08
Release Date 2021-04-07
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7JPI
Keywords:
Title:
Crystal structure of EBOV glycoprotein with modified HR2 stalk at 2.3A resolution
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.28 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
H 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein
Chain IDs:A
Chain Length:297
Number of Molecules:1
Biological Source:Ebola virus - Mayinga, Zaire, 1976
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein
Gene (Uniprot):GP
Mutations:W615L
Chain IDs:B
Chain Length:165
Number of Molecules:1
Biological Source:Ebola virus - Mayinga, Zaire, 1976
Primary Citation
Single-component multilayered self-assembling nanoparticles presenting rationally designed glycoprotein trimers as Ebola virus vaccines.
Nat Commun 12 2633 2633 (2021)
PMID: 33976149 DOI: 10.1038/s41467-021-22867-w

Abstact

Ebola virus (EBOV) glycoprotein (GP) can be recognized by neutralizing antibodies (NAbs) and is the main target for vaccine design. Here, we first investigate the contribution of the stalk and heptad repeat 1-C (HR1C) regions to GP metastability. Specific stalk and HR1C modifications in a mucin-deleted form (GPΔmuc) increase trimer yield, whereas alterations of HR1C exert a more complex effect on thermostability. Crystal structures are determined to validate two rationally designed GPΔmuc trimers in their unliganded state. We then display a modified GPΔmuc trimer on reengineered protein nanoparticles that encapsulate a layer of locking domains (LD) and a cluster of helper T-cell epitopes. In mice and rabbits, GP trimers and nanoparticles elicit cross-ebolavirus NAbs, as well as non-NAbs that enhance pseudovirus infection. Repertoire sequencing reveals quantitative profiles of vaccine-induced B-cell responses. This study demonstrates a promising vaccine strategy for filoviruses, such as EBOV, based on GP stabilization and nanoparticle display.

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