7FDE image
Deposition Date 2021-07-16
Release Date 2021-12-29
Last Version Date 2024-06-12
Entry Detail
PDB ID:
7FDE
Keywords:
MOTOR PROTEIN
Title:
CryoEM Structures of Reconstituted V-ATPase, Oxr1 bound V1
Biological Source:
Source Organism:
Saccharomyces cerevisiae S288C (Taxon ID: 559292)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7FDE validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Yeast Vacuolar ATPase A subunit
Chain IDs:D (auth: A), F (auth: C), H (auth: E)
Chain Length:617
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae S288C
UniProt ID:P17255 Pfam ID:PF02874, PF16886, PF00006, PF22919
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit B
Gene (Uniprot):VMA2
Chain IDs:E (auth: B), G (auth: D), I (auth: F)
Chain Length:517
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae S288C
UniProt ID:P16140 Pfam ID:PF02874, PF00006, PF22919
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit E
Gene (Uniprot):VMA4
Chain IDs:B (auth: G), J (auth: K), N (auth: I)
Chain Length:233
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae S288C
UniProt ID:P22203 Pfam ID:PF01991
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit G
Chain IDs:C (auth: H), K (auth: L), O (auth: J)
Chain Length:122
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae S288C
UniProt ID:P48836 Pfam ID:PF03179
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit D
Gene (Uniprot):VMA8
Chain IDs:L (auth: M)
Chain Length:256
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
UniProt ID:P32610 Pfam ID:PF01813
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit F
Gene (Uniprot):VMA7
Chain IDs:M (auth: N)
Chain Length:118
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
UniProt ID:P39111 Pfam ID:PF01990
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit C
Gene (Uniprot):VMA5
Chain IDs:A (auth: O)
Chain Length:392
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
UniProt ID:P31412 Pfam ID:PF03223
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Oxidation resistance protein 1
Gene (Uniprot):OXR1
Chain IDs:P
Chain Length:273
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
UniProt ID:Q08952 Pfam ID:PF07534
Ligand Molecules
NA
Primary Citation
CryoEM Structures of Reconstituted V-ATPase and Oxr1-bound V1 Reveal a Novel Mechanism of Regulation.
Embo J. ? ? ? (2021)
Primary Citation of related structures
7FDE