ISDA: 7FDE

Deposition Date 2021-07-16

Release Date 2021-12-29

Last Version Date 2024-06-12

Entry Detail

PDB ID:

7FDE

Keywords:

MOTOR PROTEIN

Title:

CryoEM Structures of Reconstituted V-ATPase, Oxr1 bound V1

Biological Source:

Source Organism(s):

Saccharomyces cerevisiae S288C (Taxon ID: 559292)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.80 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Yeast Vacuolar ATPase A subunit
Chain IDs:D (auth: A), F (auth: C), H (auth: E)
Chain Length:617
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P17255 Pfam ID:PF02874, PF16886, PF00006, PF22919

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit B
Gene (Uniprot):VMA2
Chain IDs:E (auth: B), G (auth: D), I (auth: F)
Chain Length:517
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P16140 Pfam ID:PF02874, PF00006, PF22919

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit E
Gene (Uniprot):VMA4
Chain IDs:B (auth: G), J (auth: K), N (auth: I)
Chain Length:233
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P22203 Pfam ID:PF01991

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit G
Chain IDs:C (auth: H), K (auth: L), O (auth: J)
Chain Length:122
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P48836 Pfam ID:PF03179

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit D
Gene (Uniprot):VMA8
Chain IDs:L (auth: M)
Chain Length:256
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P32610 Pfam ID:PF01813

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit F
Gene (Uniprot):VMA7
Chain IDs:M (auth: N)
Chain Length:118
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P39111 Pfam ID:PF01990

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit C
Gene (Uniprot):VMA5
Chain IDs:A (auth: O)
Chain Length:392
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P31412 Pfam ID:PF03223

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Oxidation resistance protein 1
Gene (Uniprot):OXR1
Chain IDs:P
Chain Length:273
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:Q08952 Pfam ID:PF07534

Ligand Molecules

Primary Citation

CryoEM Structures of Reconstituted V-ATPase and Oxr1-bound V1 Reveal a Novel Mechanism of Regulation.

Khan, M.M, Lee, S, Oot, R.A, Couoh-Cardel, S, Kim, H, Wilkens, S, Roh, S.H.Show

Embo J. ? ? ? (2021)

Primary Citation of related structures

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