7FBR image
Entry Detail
PDB ID:
7FBR
Title:
Solution structure of The first RNA binding domain of Matrin-3
Biological Source:
PDB Version:
Deposition Date:
2021-07-12
Release Date:
2022-02-16
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with favorable non-bond energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Matrin-3
Mutations:S397R
Chain IDs:A
Chain Length:102
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
1 H, 13 C and 15 N resonance assignments and solution structures of the two RRM domains of Matrin-3.
Biomol.Nmr Assign. 16 41 49 (2022)
PMID: 34783967 DOI: 10.1007/s12104-021-10057-0

Abstact

Matrin-3 is a multifunctional protein that binds to both DNA and RNA. Its DNA-binding activity is linked to the formation of the nuclear matrix and transcriptional regulation, while its RNA-binding activity is linked to mRNA metabolism including splicing, transport, stabilization, and degradation. Correspondingly, Matrin-3 has two zinc finger domains for DNA binding and two consecutive RNA recognition motif (RRM) domains for RNA binding. Matrin-3 has been reported to cause amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD) when its disordered region contains pathogenic mutations. Simultaneously, it has been shown that the RNA-binding activity of Matrin-3 mediated by its RRM domains, affects the formation of insoluble cytoplasmic granules, which are related to the pathogenic mechanism of ALS/FTD. Thus, the effect of the RRM domains on the phase separation of condensed protein/RNA mixtures has to be clarified for a comprehensive understanding of ALS/FTD. Here, we report the 1H, 15N, and 13C resonance assignments of the two RNA binding domains and their solution structures. The resonance assignments and the solution structures obtained in this work will contribute to the elucidation of the molecular basis of Matrin-3 in the pathogenic mechanism of ALS and/or FTD.

Legend

Protein

Chemical

Disease

Primary Citation of related structures