7F76 image
Deposition Date 2021-06-28
Release Date 2022-05-11
Last Version Date 2025-05-14
Entry Detail
PDB ID:
7F76
Keywords:
Title:
Crystal Structure of FMN-dependent NADPH-quinone reductase (azoR) from Bacillus cohnii
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.57 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 2 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FMN-dependent NADPH-quinone reductase (azoR)
Gene (Uniprot):BC6307_03250
Chain IDs:A, B
Chain Length:196
Number of Molecules:2
Biological Source:Bacillus cohnii
Primary Citation
Structural and Functional Characteristics of FMN-Dependent NADPH-Indigo Reductase Homolog from Bacillus cohnii.
J Nutr Sci Vitaminol (Tokyo) 71 180 183 (2025)
PMID: 40301060 DOI: 10.3177/jnsv.71.180

Abstact

We found indigo reductase homolog in Bacillus cohnii gene and succeeded in production of a large amount of the recombinant homolog in Escherichia coli. The homolog exhibited FMN-dependent NADPH-quinone reductase activity, but not indigo-reducing activity. Crystal structure analysis of the enzyme revealed the formation of a binary complex with FMN, 2-propanol, and glycerol, determined at a resolution of 1.57 Å. Notably, the structure of FMN was of particular interest, as the isoalloxazine ring of FMN exhibited a butterfly-like bent conformation, with an angular deviation of approximately 9.4º to 10.9º along the axis between N5 and N10. The reason for FMN adopting a butterfly-like structure was thought that the exposure of the enzyme crystal to X-ray radiation led to the one-electron reduction of FMN, forming the semiquinone radical FMNH•.

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