7F5V image
Entry Detail
PDB ID:
7F5V
EMDB ID:
Keywords:
Title:
Drosophila P5CS filament with glutamate, ATP, and NADPH
Biological Source:
PDB Version:
Deposition Date:
2021-06-22
Release Date:
2022-04-06
Method Details:
Experimental Method:
Resolution:
3.60 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Delta-1-pyrroline-5-carboxylate synthase
Chain IDs:A, B, C, D
Chain Length:776
Number of Molecules:4
Biological Source:Drosophila melanogaster
Ligand Molecules
Primary Citation
Structural basis of dynamic P5CS filaments.
Elife 11 ? ? (2022)
PMID: 35286254 DOI: 10.7554/eLife.76107

Abstact

The bifunctional enzyme Δ1-pyrroline-5-carboxylate synthase (P5CS) is vital to the synthesis of proline and ornithine, playing an essential role in human health and agriculture. Pathogenic mutations in the P5CS gene (ALDH18A1) lead to neurocutaneous syndrome and skin relaxation connective tissue disease in humans, and P5CS deficiency seriously damages the ability to resist adversity in plants. We have recently found that P5CS forms cytoophidia in vivo and filaments in vitro. However, it is difficult to appreciate the function of P5CS filamentation without precise structures. Using cryo-electron microscopy, here we solve the structures of Drosophila full-length P5CS in three states at resolution from 3.1 to 4.3 Å. We observe distinct ligand-binding states and conformational changes for the GK and GPR domains, respectively. Divergent helical filaments are assembled by P5CS tetramers and stabilized by multiple interfaces. Point mutations disturbing those interfaces prevent P5CS filamentation and greatly reduce the enzymatic activity. Our findings reveal that filamentation is crucial for the coordination between the GK and GPR domains, providing a structural basis for the catalytic function of P5CS filaments.

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Primary Citation of related structures