7F1Y image
Deposition Date 2021-06-10
Release Date 2022-06-15
Last Version Date 2023-11-29
Entry Detail
PDB ID:
7F1Y
Keywords:
Title:
L-lactate oxidase without substrate
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.33 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Lactate oxidase
Chain IDs:A, B
Chain Length:368
Number of Molecules:2
Biological Source:Aerococcus viridans
Primary Citation
Dynamic interactions in the l-lactate oxidase active site facilitate substrate binding at pH4.5.
Biochem.Biophys.Res.Commun. 568 131 135 (2021)
PMID: 34214876 DOI: 10.1016/j.bbrc.2021.06.078

Abstact

The crystal structure of l-lactate oxidase in complex with l-lactate was solved at a 1.33 Å resolution. The electron density of the bound l-lactate was clearly shown and comparisons of the free form and substrate bound complexes demonstrated that l-lactate was bound to the FMN and an additional active site within the enzyme complex. l-lactate interacted with the related side chains, which play an important role in enzymatic catalysis and especially the coupled movement of H265 and D174, which may be essential to activity. These observations not only reveal the enzymatic mechanism for l-lactate binding but also demonstrate the dynamic motion of these enzyme structures in response to substrate binding and enzymatic reaction progression.

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Primary Citation of related structures