7F1T image
Deposition Date 2021-06-09
Release Date 2021-07-14
Last Version Date 2024-10-16
Entry Detail
PDB ID:
7F1T
Title:
Crystal structure of the human chemokine receptor CCR5 in complex with MIP-1a
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.27
R-Value Work:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:C-C motif chemokine 3,C-C chemokine receptor type 5,Rubredoxin,C-C chemokine receptor type 5
Gene (Uniprot):CCL3, CCR5
Mutagens:T15C,T108C,C150Y,M156A,G255N,A376D,R417A,T427A,K446E
Chain IDs:A
Chain Length:491
Number of Molecules:1
Biological Source:Homo sapiens, Clostridium pasteurianum
Ligand Molecules
Primary Citation
Structural basis for chemokine recognition and receptor activation of chemokine receptor CCR5.
Nat Commun 12 4151 4151 (2021)
PMID: 34230484 DOI: 10.1038/s41467-021-24438-5

Abstact

The chemokine receptor CCR5 plays a vital role in immune surveillance and inflammation. However, molecular details that govern its endogenous chemokine recognition and receptor activation remain elusive. Here we report three cryo-electron microscopy structures of Gi1 protein-coupled CCR5 in a ligand-free state and in complex with the chemokine MIP-1α or RANTES, as well as the crystal structure of MIP-1α-bound CCR5. These structures reveal distinct binding modes of the two chemokines and a specific accommodate pattern of the chemokine for the distal N terminus of CCR5. Together with functional data, the structures demonstrate that chemokine-induced rearrangement of toggle switch and plasticity of the receptor extracellular region are critical for receptor activation, while a conserved tryptophan residue in helix II acts as a trigger of receptor constitutive activation.

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Primary Citation of related structures
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