7F1E image
Deposition Date 2021-06-09
Release Date 2022-01-12
Last Version Date 2023-11-29
Entry Detail
PDB ID:
7F1E
Keywords:
Title:
Structure of METTL6 bound with SAM
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.59 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 43
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:tRNA N(3)-methylcytidine methyltransferase METTL6
Gene (Uniprot):METTL6
Chain IDs:A, B
Chain Length:286
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis for METTL6-mediated m3C RNA methylation.
Biochem.Biophys.Res.Commun. 589 159 164 (2021)
PMID: 34922197 DOI: 10.1016/j.bbrc.2021.12.013

Abstact

RNA modifications play important roles in mediating the biological functions of RNAs. 3-methylcytidine (m3C), albeit less abundant, is found to exist extensively in tRNAs, rRNAs and mRNAs. Human METTL6 is a m3C methyltransferase for tRNAs, including tRNASER(UGA). We solved the structure of human METTL6 in the presence of S-adenosyl-L-methionine and found by enzyme assay that recombinant human METTL6 is active towards tRNASER(UGA). Structural analysis indicated the detailed interactions between S-adenosyl-L-methionine and METTL6, and suggested potential tRNA binding region on the surface of METTL6. The structural research, complemented by biochemistry enzyme assay, will definitely shed light on the design of potent inhibitors for METTL6 in near future.

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Primary Citation of related structures