7EWR image
Deposition Date 2021-05-26
Release Date 2021-12-01
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7EWR
Title:
Cryo-EM structure of human GPR158 in complex with RGS7-Gbeta5 in a 2:2:2 ratio
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Probable G-protein coupled receptor 158
Gene (Uniprot):GPR158
Chain IDs:C (auth: A), D (auth: B)
Chain Length:1138
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Regulator of G-protein signaling 7
Gene (Uniprot):RGS7
Chain IDs:A (auth: E), E (auth: C)
Chain Length:530
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein subunit beta-5
Gene (Uniprot):GNB5
Chain IDs:B (auth: F), F (auth: D)
Chain Length:395
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure of the class C orphan GPCR GPR158 in complex with RGS7-G beta 5.
Nat Commun 12 6805 6805 (2021)
PMID: 34815401 DOI: 10.1038/s41467-021-27147-1

Abstact

GPR158, a class C orphan GPCR, functions in cognition, stress-induced mood control, and synaptic development. Among class C GPCRs, GPR158 is unique as it lacks a Venus flytrap-fold ligand-binding domain and terminates Gαi/o protein signaling through the RGS7-Gβ5 heterodimer. Here, we report the cryo-EM structures of GPR158 alone and in complex with one or two RGS7-Gβ5 heterodimers. GPR158 dimerizes through Per-Arnt-Sim-fold extracellular and transmembrane (TM) domains connected by an epidermal growth factor-like linker. The TM domain (TMD) reflects both inactive and active states of other class C GPCRs: a compact intracellular TMD, conformations of the two intracellular loops (ICLs) and the TMD interface formed by TM4/5. The ICL2, ICL3, TM3, and first helix of the cytoplasmic coiled-coil provide a platform for the DHEX domain of one RGS7 and the second helix recruits another RGS7. The unique features of the RGS7-binding site underlie the selectivity of GPR158 for RGS7.

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Primary Citation of related structures