7EOZ image
Deposition Date 2021-04-24
Release Date 2022-08-24
Last Version Date 2025-03-19
Entry Detail
PDB ID:
7EOZ
Keywords:
Title:
The structure of rice Defective Pollen Wall (DPW) in the complex with its cofactor NADP
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 61
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Fatty acyl-CoA reductase
Chain IDs:A, B
Chain Length:532
Number of Molecules:2
Biological Source:Oryza sativa Japonica Group
Ligand Molecules
Primary Citation
Structural basis for the dual roles of DPW in lipid and UDP-sugar metabolism during rice anther development.
Plant Physiol Biochem. 222 109762 109762 (2025)
PMID: 40068458 DOI: 10.1016/j.plaphy.2025.109762

Abstact

Fatty acids and uridine diphosphate (UDP)-sugars are essential metabolites involved in the biosynthesis of polysaccharides and lipids, both of which are critical for anther development in plants. Our previous study identified Defective Pollen Wall (DPW), a rice fatty acyl carrier protein reductase (FAR), as a key factor in pollen wall formation. In this study, we demonstrate that the structure of DPW in complex with its cofactor NADP+ exhibits structural similarities to that of UDP-glucose epimerase (UGE). In vitro enzymatic assays utilizing recombinant DPW confirmed its ability to interconvert UDP-glucose (UDP-Glc) and UDP-galactose (UDP-Gal) in an NADP(H)-dependent manner. Mutations in conserved NADP(H)-binding residues abolished both DPW's FAR and UGE activities. In vivo assays showed that the dpw mutation causes UDP-Glc accumulation, disrupting the balance between UDP-Glc and UDP-Gal in rice anthers. Taken together, our findings provide insights into the dual roles of DPW in lipid and UDP-sugar metabolism during rice anther development, shedding light on how plants integrate metabolic pathways through multifunctional enzymes to regulate male reproductive development.

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