7EL5 image
Deposition Date 2021-04-08
Release Date 2022-09-14
Last Version Date 2024-10-23
Entry Detail
PDB ID:
7EL5
Title:
Crystal structure of Sizzled protein from Xenopus Laevis
Biological Source:
Source Organism:
Xenopus laevis (Taxon ID: 8355)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Secreted Xwnt8 inhibitor sizzled
Chain IDs:A, B
Chain Length:275
Number of Molecules:2
Biological Source:Xenopus laevis
Primary Citation
Dynamics of the secreted frizzled related protein Sizzled and potential implications for binding to bone morphogenetic protein-1 (BMP-1).
Sci Rep 12 14850 14850 (2022)
PMID: 36050373 DOI: 10.1038/s41598-022-18795-4

Abstact

Sizzled (Szl) is both a secreted frizzled related protein (sFRP) and a naturally occurring inhibitor of the zinc metalloproteinase bone morphogenetic protein-1 (BMP-1), a key regulator of extracellular matrix assembly and growth factor activation. Here we present a new crystal structure for Szl which differs from that previously reported by a large scale (90°) hinge rotation between its cysteine-rich and netrin-like domains. We also present results of a molecular docking analysis showing interactions likely to be involved in the inhibition of BMP-1 activity by Szl. When compared with known structures of BMP-1 in complex with small molecule inhibitors, this reveals features that may be helpful in the design of new inhibitors to prevent the excessive accumulation of extracellular matrix that is the hallmark of fibrotic diseases.

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Primary Citation of related structures