7EGP image
Entry Detail
PDB ID:
7EGP
EMDB ID:
EMD-31137
Keywords:
DNA BINDING PROTEIN
Title:
The structure of SWI/SNF-nucleosome complex
Biological Source:
Source Organism:
Saccharomyces cerevisiae (strain ATCC 204508 / S288c), Xenopus laevis, synthetic construct
Host Organism:
Escherichia coli-Pichia pastoris shuttle vector pPpARG4
PDB Version:
Deposition Date:
2021-03-24
Release Date:
2022-01-12
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
6.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7EGP validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Description:Transcription regulatory protein SNF2
Chain IDs:H (auth: A)
Chain Length:982
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P22082 Pfam ID:PF00176, PF00271, PF14619
Protein Blast
Polymer Type:polypeptide(L)
Description:SWI/SNF chromatin-remodeling complex subunit SWI1
Chain IDs:A (auth: B)
Chain Length:1093
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P09547 Pfam ID:PF01388
Protein Blast
Polymer Type:polypeptide(L)
Description:SWI/SNF chromatin-remodeling complex subunit SNF5
Chain IDs:B (auth: C)
Chain Length:918
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P18480 Pfam ID:PF04855
Protein Blast
Polymer Type:polypeptide(L)
Description:SWI/SNF complex subunit SWI3
Chain IDs:C (auth: D), G (auth: E)
Chain Length:836
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P32591 Pfam ID:PF04433, PF00249, PF16495
Protein Blast
Polymer Type:polypeptide(L)
Description:Transcription regulatory protein SNF12
Chain IDs:D (auth: H)
Chain Length:566
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P53628
Protein Blast
Polymer Type:polypeptide(L)
Description:Transcription regulatory protein SNF6
Chain IDs:E (auth: I)
Chain Length:332
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P18888
Protein Blast
Polymer Type:polypeptide(L)
Description:SWI/SNF global transcription activator complex subunit SWP82
Chain IDs:F (auth: J)
Chain Length:634
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P43554 Pfam ID:PF08624
Protein Blast
Polymer Type:polypeptide(L)
Description:Regulator of Ty1 transposition protein 102
Chain IDs:I (auth: L)
Chain Length:157
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P53330 Pfam ID:PF09510
Protein Blast
Polymer Type:polypeptide(L)
Description:Actin-related protein 7
Chain IDs:J (auth: M)
Chain Length:477
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:Q12406 Pfam ID:PF00022
Protein Blast
Polymer Type:polypeptide(L)
Description:Actin-like protein ARP9
Chain IDs:K (auth: N)
Chain Length:467
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:Q05123 Pfam ID:PF00022
Protein Blast
Polymer Type:polypeptide(L)
Description:Histone H3.2
Chain IDs:L (auth: O), P (auth: S)
Chain Length:135
Number of Molecules:2
Biological Source:Xenopus laevis
UniProt ID:P84233 Pfam ID:PF00125
Protein Blast
Polymer Type:polypeptide(L)
Description:Histone H4
Chain IDs:M (auth: P), Q (auth: T)
Chain Length:102
Number of Molecules:2
Biological Source:Xenopus laevis
UniProt ID:P62799 Pfam ID:PF15511
Protein Blast
Polymer Type:polypeptide(L)
Description:Histone H2A
Chain IDs:N (auth: Q), R (auth: U)
Chain Length:129
Number of Molecules:2
Biological Source:Xenopus laevis
UniProt ID:Q6AZJ8 Pfam ID:PF00125, PF16211
Protein Blast
Polymer Type:polypeptide(L)
Description:Histone H2B 1.1
Chain IDs:O (auth: R), S (auth: V)
Chain Length:122
Number of Molecules:2
Biological Source:Xenopus laevis
UniProt ID:P02281 Pfam ID:PF00125
Polymer Type:polydeoxyribonucleotide
Description:DNA (239-MER)
Chain IDs:T (auth: W)
Chain Length:235
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Description:DNA (239-MER)
Chain IDs:U (auth: X)
Chain Length:235
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
ADP
BEF
MG
Primary Citation
Structure of the SWI/SNF complex bound to the nucleosome and insights into the functional modularity.
Cell Discov 7 28 28 (2021)
PMID: 33907182 DOI: 10.1038/s41421-021-00262-5
Primary Citation of related structures
7EGP