ISDA

Deposition Date 2021-03-24

Release Date 2022-01-12

Last Version Date 2024-06-05

Entry Detail

PDB ID:

7EG6

Keywords:

DNA BINDING PROTEIN/DNA

Title:

Snf5 Finger Helix bound to the nucleosome

Biological Source:

Source Organism:

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Taxon ID: 559292)
Xenopus laevis (Taxon ID: 8355)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli-Pichia pastoris shuttle vector pPpARG4

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.10 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H3.2
Chain IDs:B (auth: A), F (auth: E)
Chain Length:135
Number of Molecules:2
Biological Source:Xenopus laevis

UniProt ID:P84233 Pfam ID:PF00125

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H4
Chain IDs:C (auth: B), G (auth: F)
Chain Length:102
Number of Molecules:2
Biological Source:Xenopus laevis

UniProt ID:P62799 Pfam ID:PF15511

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H2A type 1
Chain IDs:D (auth: C), H (auth: G)
Chain Length:129
Number of Molecules:2
Biological Source:Xenopus laevis

UniProt ID:P06897 Pfam ID:PF00125, PF16211

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H2B 1.1
Chain IDs:E (auth: D), I (auth: H)
Chain Length:122
Number of Molecules:2
Biological Source:Xenopus laevis

UniProt ID:P02281 Pfam ID:PF00125

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (235-MER)
Chain IDs:J (auth: I)
Chain Length:235
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (235-MER)
Chain IDs:K (auth: J)
Chain Length:235
Number of Molecules:1
Biological Source:synthetic construct

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:SWI/SNF chromatin-remodeling complex subunit SNF5
Gene (Uniprot):SNF5
Chain IDs:A (auth: M)
Chain Length:905
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt ID:P18480 Pfam ID:PF04855

Ligand Molecules

Primary Citation

Structure of the SWI/SNF complex bound to the nucleosome and insights into the functional modularity.

He, Z.Y, Chen, K.J, Ye, Y.P, Chen, Z.C.Show

Cell Discov 7 28 28 (2021)

PMID: 33907182 DOI: 10.1038/s41421-021-00262-5

Primary Citation of related structures