ISDA: 7EDB

Deposition Date 2021-03-15

Release Date 2022-03-16

Last Version Date 2023-11-29

Entry Detail

PDB ID:

7EDB

Keywords:

DNA BINDING PROTEIN

Title:

EcoT38I restriction endonuclease complexed with DNA

Biological Source:

Source Organism:

Escherichia phage P2 (Taxon ID: 10679)
Escherichia coli (Taxon ID: 562)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.39 Å

R-Value Free:

0.19

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

P 64 2 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:EcoT38I restriction endonuclease
Gene (Uniprot):ecoT38IR
Chain IDs:A, B
Chain Length:351
Number of Molecules:2
Biological Source:Escherichia phage P2

UniProt ID:Q83VS8 Pfam ID:PF09566

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*GP*CP*AP*GP*AP*GP*CP*TP*CP*AP*CP*G)-3')
Chain IDs:C (auth: E)
Chain Length:13
Number of Molecules:1
Biological Source:Escherichia coli

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*GP*TP*GP*AP*GP*CP*TP*CP*TP*GP*C)-3')
Chain IDs:D (auth: F)
Chain Length:13
Number of Molecules:1
Biological Source:Escherichia coli

Ligand Molecules

GOL

PGE

TRS

Primary Citation

Structural analysis of EcoT38I restriction endonuclease

Kita, K, Mikami, B.Show

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Primary Citation of related structures

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