ISDA: 7EAM

Deposition Date 2021-03-07

Release Date 2021-03-17

Last Version Date 2024-11-13

Entry Detail

PDB ID:

7EAM

Keywords:

VIRAL PROTEIN, IMMUNE SYSTEM

Title:

immune complex of SARS-CoV-2 RBD and cross-neutralizing antibody 7D6

Biological Source:

Source Organism:

Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Mus musculus (Taxon ID: 10090)

Host Organism:

Trichoplusia ni

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.40 Å

R-Value Free:

0.18

R-Value Work:

0.17

R-Value Observed:

0.17

Space Group:

P 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Spike protein S1
Gene (Uniprot):S
Chain IDs:A, D (auth: B)
Chain Length:233
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTC2 Pfam ID:PF09408

Polymer Type:polypeptide(L)
Molecule:the heavy chain of Fab fragment of antibody 7D6
Chain IDs:B (auth: H), E (auth: C)
Chain Length:220
Number of Molecules:2
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:the light chain of Fab fragment of antibody 7D6
Chain IDs:C (auth: L), F (auth: D)
Chain Length:214
Number of Molecules:2
Biological Source:Mus musculus

Ligand Molecules

NAG

Primary Citation

Cross-neutralizing antibodies bind a SARS-CoV-2 cryptic site and resist circulating variants.

Li, T, Xue, W, Zheng, Q, Song, S, Yang, C, Xiong, H, Zhang, S, Hong, M, Zhang, Y, Yu, H, Zhang, Y, Sun, H, Huang, Y, Deng, T, Chi, X, Li, J, Wang, S, Zhou, L, Chen, T, Wang, Y, Cheng, T, Zhang, T, Yuan, Q, Zhao, Q, Zhang, J, McLellan, J.S, Zhou, Z.H, Zhang, Z, Li, S, Gu, Y, Xia, N.Show

Nat Commun 12 5652 ? (2021)

DOI: 10.1038/s41467-021-25997-3

Primary Citation of related structures

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