7E6J image
Deposition Date 2021-02-22
Release Date 2021-06-30
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7E6J
Keywords:
Title:
Aspartyl/Asparaginyl beta-hydroxylase (AspH) H725A in complex with Factor X peptide fragment (39mer-4Ser)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Aspartyl/asparaginyl beta-hydroxylase
Gene (Uniprot):ASPH
Mutations:H725A
Chain IDs:A
Chain Length:429
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Peptide from Factor X light chain
Gene (Uniprot):F10
Mutations:C90S,C95S,C112S,C121S
Chain IDs:B
Chain Length:39
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Human Oxygenase Variants Employing a Single Protein Fe II Ligand Are Catalytically Active.
Angew.Chem.Int.Ed.Engl. 60 14657 14663 (2021)
PMID: 33887099 DOI: 10.1002/anie.202103711

Abstact

Aspartate/asparagine-β-hydroxylase (AspH) is a human 2-oxoglutarate (2OG) and FeII oxygenase that catalyses C3 hydroxylations of aspartate/asparagine residues of epidermal growth factor-like domains (EGFDs). Unusually, AspH employs two histidine residues to chelate FeII rather than the typical triad of two histidine and one glutamate/aspartate residue. We report kinetic, inhibition, and crystallographic studies concerning human AspH variants in which either of its FeII binding histidine residues are substituted for alanine. Both the H725A and, in particular, the H679A AspH variants retain substantial catalytic activity. Crystal structures clearly reveal metal-ligation by only a single protein histidine ligand. The results have implications for the functional assignment of 2OG oxygenases and for the design of non-protein biomimetic catalysts.

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Primary Citation of related structures