7E4L image
Entry Detail
PDB ID:
7E4L
Keywords:
Title:
Conversion of pyrophosphate-dependent myo-inositol-1 kinase into myo-inositol-3 kinase by N78L/S89L mutation
Biological Source:
PDB Version:
Deposition Date:
2021-02-14
Release Date:
2021-05-05
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:PfkB domain-containing protein
Mutations:N78L/S89L
Chain IDs:A, B
Chain Length:286
Number of Molecules:2
Biological Source:Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Primary Citation
Altering the Phosphorylation Position of Pyrophosphate-Dependent myo -Inositol-1-Kinase Based on Its Crystal Structure.
Acs Chem.Biol. 16 794 799 (2021)
PMID: 33877806 DOI: 10.1021/acschembio.0c00733

Abstact

Most kinases utilize ATP as a phosphate donor and phosphorylate a wide range of phosphate acceptors. An alternative phosphate donor is inorganic pyrophosphate (PPi), which costs only 1/1000 of ATP. To develop a method to engineer PPi-dependent kinases, we herein aimed to alter the product of PPi-dependent myo-inositol kinase from d-myo-inositol 1-phosphate to d-myo-inositol 3-phosphate. For this purpose, we introduced the myo-inositol recognition residues of the ATP-dependent myo-inositol-3-kinase into the PPi-dependent myo-inositol-1-kinase. This replacement was expected to change the 3D arrangements of myo-inositol in the active site and bring the hydroxyl group at the 3C position close to the catalytic residue. LC-MS and NMR analyses proved that the engineered enzyme successfully produced myo-inositol 3-phosphate from PPi and myo-inositol.

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