7E2T image
Entry Detail
PDB ID:
7E2T
Title:
Synechocystis GUN4 in complex with phycocyanobilin
Biological Source:
PDB Version:
Deposition Date:
2021-02-07
Release Date:
2021-08-25
Method Details:
Experimental Method:
Resolution:
1.10 Å
R-Value Free:
0.15
R-Value Work:
0.12
R-Value Observed:
0.12
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ycf53-like protein
Chain IDs:A
Chain Length:233
Number of Molecules:1
Biological Source:Synechocystis sp. (strain PCC 6803 / Kazusa)
Primary Citation
Structural basis of bilin binding by the chlorophyll biosynthesis regulator GUN4.
Protein Sci. 30 2083 2091 (2021)
PMID: 34382282 DOI: 10.1002/pro.4164

Abstact

The chlorophyll biosynthesis regulator GENOMES UNCOUPLED 4 (GUN4) is conserved in nearly all oxygenic photosynthetic organisms. Recently, GUN4 has been found to be able to bind the linear tetrapyrroles (bilins) and stimulate the magnesium chelatase activity in the unicellular green alga Chlamydomonas reinhardtii. Here, we characterize GUN4 proteins from Arabidopsis thaliana and the cyanobacterium Synechocystis sp. PCC 6803 for their ability to bind bilins, and present the crystal structures of Synechocystis GUN4 in biliverdin-bound, phycocyanobilin-bound, and phytochromobilin-bound forms at the resolutions of 1.05, 1.10, and 1.70 Å, respectively. These linear molecules adopt a cyclic-helical conformation, and bind more tightly than planar porphyrins to the tetrapyrrole-binding pocket of GUN4. Based on structural comparison, we propose a working model of GUN4 in regulation of tetrapyrrole biosynthetic pathway, and address the role of the bilin-bound GUN4 in retrograde signaling.

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