7E2M image
Deposition Date 2021-02-05
Release Date 2021-03-17
Last Version Date 2023-11-29
Entry Detail
PDB ID:
7E2M
Keywords:
Title:
Crystal structure of the RWD domain of human GCN2 - 2
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.35 Å
R-Value Free:
0.26
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 63
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:eIF-2-alpha kinase GCN2
Gene (Uniprot):EIF2AK4
Chain IDs:A, B, C, D, E, F
Chain Length:135
Number of Molecules:6
Biological Source:Homo sapiens
Primary Citation
Crystal structures reveal a novel dimer of the RWD domain of human general control nonderepressible 2.
Biochem.Biophys.Res.Commun. 549 164 170 (2021)
PMID: 33676185 DOI: 10.1016/j.bbrc.2021.02.111

Abstact

General control nonderepressible 2 (GCN2) is a serine/threonine protein kinase, detecting a variety of stresses including amino acid starvation, reactive oxygen species, etc. in eukaryotic cells. Activation of GCN2 requires the interaction of the N-terminal RWD domain with the upstream GCN1 protein and the dimerization by the kinase domain. In this study, we determined two crystal structures of the RWD domain of human GCN2 in two different crystal packing modes. These two different crystal structures reveal a same dimer of the RWD domain, which has not been reported in previous studies. We further confirmed this novel dimer interaction in solution using gel filtration experiments, and in human embryonic kidney (HEK) 293 cells using bimolecular fluorescence complementation (BiFC) and co-immunoprecipitation (co-IP) assays. Together, this study discovers a potential protein-protein interface on the RWD domain of human GCN2, and suggests a possible regulation between the interaction of GCN1 and the formation of GCN2 dimer.

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