7E2E image
Entry Detail
PDB ID:
7E2E
Keywords:
Title:
Crystal structure of the Estrogen-Related Receptor alpha (ERRalpha) ligand-binding domain (LBD) in complex with an agonist DS45500853 and a PGC-1alpha peptide
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-02-05
Release Date:
2021-06-30
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.30
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 43
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Steroid hormone receptor ERR1
Chain IDs:A, C (auth: B)
Chain Length:245
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Mutations:C207A
Chain IDs:B (auth: P), D (auth: Q)
Chain Length:12
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Discovery of a Novel Class of ERR alpha Agonists.
Acs Med.Chem.Lett. 12 817 821 (2021)
PMID: 34055231 DOI: 10.1021/acsmedchemlett.1c00100

Abstact

A novel class of estrogen-related receptor α (ERRα) agonists has been discovered. A structure-activity relationship study of high-throughput screening hits 1 and 2 led to the discovery of benzimidazole 3d (DS20362725) and acetophenone analogue 5c (DS45500853). The X-ray crystal structure of the ERRα ligand-binding domain in complex with 5c and PGC-1α coactivator peptide revealed conformational changes in the ligand-binding pocket to accommodate 5c and the key interaction between the protein and ligand. Since both analogues avoided PPARγ transcriptional activity, they can be useful tool compounds for investigating biological ERRα functions.

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Primary Citation of related structures