7DNO image
Deposition Date 2020-12-10
Release Date 2021-02-10
Last Version Date 2023-11-29
Entry Detail
PDB ID:
7DNO
Title:
Characterization of Peptide Ligands Against WDR5 Isolated Using Phage Display Technique
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.03 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:WD repeat-containing protein 5
Gene (Uniprot):WDR5
Chain IDs:A, B
Chain Length:313
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:CYS-ARG-THR-LEU-PRO-PHE
Chain IDs:C, D
Chain Length:9
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Phage-Display Based Discovery and Characterization of Peptide Ligands against WDR5.
Molecules 26 ? ? (2021)
PMID: 33668971 DOI: 10.3390/molecules26051225

Abstact

WD40 is a ubiquitous domain presented in at least 361 human proteins and acts as scaffold to form protein complexes. Among them, WDR5 protein is an important mediator in several protein complexes to exert its functions in histone modification and chromatin remodeling. Therefore, it was considered as a promising epigenetic target involving in anti-cancer drug development. In view of the protein-protein interaction nature of WDR5, we initialized a campaign to discover new peptide-mimic inhibitors of WDR5. In current study, we utilized the phage display technique and screened with a disulfide-based cyclic peptide phage library. Five rounds of biopanning were performed and isolated clones were sequenced. By analyzing the sequences, total five peptides were synthesized for binding assay. The four peptides are shown to have the moderate binding affinity. Finally, the detailed binding interactions were revealed by solving a WDR5-peptide cocrystal structure.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback