7DL2 image
Deposition Date 2020-11-25
Release Date 2020-12-16
Last Version Date 2024-03-27
Entry Detail
PDB ID:
7DL2
Keywords:
Title:
Cryo-EM structure of human TSC complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Isoform 7 of Tuberin
Gene (Uniprot):TSC2
Chain IDs:B (auth: A), C (auth: B)
Chain Length:1692
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Hamartin
Gene (Uniprot):TSC1
Chain IDs:A (auth: D), D (auth: C)
Chain Length:1164
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:TBC1 domain family member 7
Gene (Uniprot):TBC1D7
Chain IDs:E
Chain Length:267
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:unknown protein
Chain IDs:F
Chain Length:261
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural insights into TSC complex assembly and GAP activity on Rheb.
Nat Commun 12 339 339 (2021)
PMID: 33436626 DOI: 10.1038/s41467-020-20522-4

Abstact

Tuberous sclerosis complex (TSC) integrates upstream stimuli and regulates cell growth by controlling the activity of mTORC1. TSC complex functions as a GTPase-activating protein (GAP) towards small GTPase Rheb and inhibits Rheb-mediated activation of mTORC1. Mutations in TSC genes cause tuberous sclerosis. In this study, the near-atomic resolution structure of human TSC complex reveals an arch-shaped architecture, with a 2:2:1 stoichiometry of TSC1, TSC2, and TBC1D7. This asymmetric complex consists of two interweaved TSC1 coiled-coil and one TBC1D7 that spans over the tail-to-tail TSC2 dimer. The two TSC2 GAP domains are symmetrically cradled within the core module formed by TSC2 dimerization domain and central coiled-coil of TSC1. Structural and biochemical analyses reveal TSC2 GAP-Rheb complimentary interactions and suggest a catalytic mechanism, by which an asparagine thumb (N1643) stabilizes γ-phosphate of GTP and accelerate GTP hydrolysis of Rheb. Our study reveals mechanisms of TSC complex assembly and GAP activity.

Legend

Protein

Chemical

Disease

Primary Citation of related structures