7DIE image
Deposition Date 2020-11-19
Release Date 2021-05-26
Last Version Date 2024-03-27
Entry Detail
PDB ID:
7DIE
Title:
Crystal structure of M. penetrans Ferritin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.17
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
I 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ferritin
Gene (Uniprot):MYPE2930
Chain IDs:A, B, C, D, E, F
Chain Length:179
Number of Molecules:6
Biological Source:Mycoplasma penetrans (strain HF-2)
Ligand Molecules
Primary Citation
Ferritin with Atypical Ferroxidase Centers Takes B-Channels as the Pathway for Fe 2+ Uptake from Mycoplasma .
Inorg.Chem. 60 7207 7216 (2021)
PMID: 33852289 DOI: 10.1021/acs.inorgchem.1c00265

Abstact

Here, we present a 1.9 Å resolution crystal structure of Mycoplasma Penetrans ferritin, which reveals that its ferroxidase center is located on the inner surface of ferritin but not buried within the four-helix of each subunit. Such a ferroxidase center exhibits a lower iron oxidation activity as compared to the reported ferritin. More importantly, we found that Fe2+ enters into the center via the rarely reported B-channels rather than the normal 3- or 4-fold channels. All these findings may provide the structural bases to explore the new iron oxidation mechanism adopted by this special ferritin, which is beneficial for understanding the relationship between the structure and function of ferritin.

Legend

Protein

Chemical

Disease

Primary Citation of related structures