7DI8 image
Entry Detail
PDB ID:
7DI8
Keywords:
Title:
Electron crystallographic structure of Catalase using a direct electron detector at 300 kV
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2020-11-18
Release Date:
2020-12-09
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.34
R-Value Work:
0.30
R-Value Observed:
0.31
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Catalase
Chain IDs:A, B, C, D
Chain Length:527
Number of Molecules:4
Biological Source:Bos taurus
Primary Citation
Protein and Organic-Molecular Crystallography With 300kV Electrons on a Direct Electron Detector.
Front Mol Biosci 7 612226 612226 (2020)
PMID: 33469549 DOI: 10.3389/fmolb.2020.612226

Abstact

Electron 3D crystallography can reveal the atomic structure from undersized crystals of various samples owing to the strong scattering power of electrons. Here, a direct electron detector DE64 was tested for small and thin crystals of protein and an organic molecule using a JEOL CRYO ARM 300 electron microscope. The microscope is equipped with a cold-field emission gun operated at an accelerating voltage of 300 kV, quad condenser lenses for parallel illumination, an in-column energy filter, and a stable rotational goniometer stage. Rotational diffraction data were collected in an unsupervised manner from crystals of a heme-binding enzyme catalase and a representative organic semiconductor material Ph-BTBT-C10. The structures were determined by molecular replacement for catalase and by the direct method for Ph-BTBT-C10. The analyses demonstrate that the system works well for electron 3D crystallography of these molecules with less damaging, a smaller point spread, and less noise than using the conventional scintillator-coupled camera.

Legend

Protein

Chemical

Disease

Primary Citation of related structures