7DFP image
Entry Detail
PDB ID:
7DFP
Title:
Human dopamine D2 receptor in complex with spiperone
Biological Source:
PDB Version:
Deposition Date:
2020-11-09
Release Date:
2020-12-30
Method Details:
Experimental Method:
Resolution:
3.10 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:D(2) dopamine receptor,Soluble cytochrome b562
Mutations:S121K,L123W,M1007W,R1098I, H1102I, R1106G
Chain IDs:A
Chain Length:360
Number of Molecules:1
Biological Source:Homo sapiens, Escherichia coli
Polymer Type:polypeptide(L)
Description:FabL
Chain IDs:B
Chain Length:215
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:FabH
Chain IDs:C
Chain Length:220
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structure of the dopamine D 2 receptor in complex with the antipsychotic drug spiperone.
Nat Commun 11 6442 6442 (2020)
PMID: 33353947 DOI: 10.1038/s41467-020-20221-0

Abstact

In addition to the serotonin 5-HT2A receptor (5-HT2AR), the dopamine D2 receptor (D2R) is a key therapeutic target of antipsychotics for the treatment of schizophrenia. The inactive state structures of D2R have been described in complex with the inverse agonists risperidone (D2Rris) and haloperidol (D2Rhal). Here we describe the structure of human D2R in complex with spiperone (D2Rspi). In D2Rspi, the conformation of the extracellular loop (ECL) 2, which composes the ligand-binding pocket, was substantially different from those in D2Rris and D2Rhal, demonstrating that ECL2 in D2R is highly dynamic. Moreover, D2Rspi exhibited an extended binding pocket to accommodate spiperone's phenyl ring, which probably contributes to the selectivity of spiperone to D2R and 5-HT2AR. Together with D2Rris and D2Rhal, the structural information of D2Rspi should be of value for designing novel antipsychotics with improved safety and efficacy.

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Primary Citation of related structures