7DC8 image
Entry Detail
PDB ID:
7DC8
Keywords:
Title:
Crystal structure of Switch Ab Fab and hIL6R in complex with ATP
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2020-10-23
Release Date:
2021-01-13
Method Details:
Experimental Method:
Resolution:
2.76 Å
R-Value Free:
0.27
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
C 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Switch Ab Fab light chain
Chain IDs:A, D
Chain Length:216
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Switch Ab Fab heavy chain
Chain IDs:B, E
Chain Length:230
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Interleukin-6 receptor subunit alpha
Mutations:C193S
Chain IDs:C, F
Chain Length:218
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation

Abstact

The extracellular adenosine triphosphate (ATP) concentration is highly elevated in the tumor microenvironment (TME) and remains tightly regulated in normal tissues. Using phage display technology, we establish a method to identify an antibody that can bind to an antigen only in the presence of ATP. Crystallography analysis reveals that ATP bound in between the antibody-antigen interface serves as a switch for antigen binding. In a transgenic mouse model overexpressing the antigen systemically, the ATP switch antibody binds to the antigen in tumors with minimal binding in normal tissues and plasma and inhibits tumor growth. Thus, we demonstrate that elevated extracellular ATP concentration can be exploited to specifically target the TME, giving therapeutic antibodies the ability to overcome on-target off-tumor toxicity.

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