7D6C image
Entry Detail
PDB ID:
7D6C
Title:
Crystal structure of CcmM N-terminal domain in complex with CcmN
Biological Source:
PDB Version:
Deposition Date:
2020-09-30
Release Date:
2021-08-04
Method Details:
Experimental Method:
Resolution:
2.89 Å
R-Value Free:
0.27
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Carbon dioxide concentrating mechanism protein CcmM
Chain IDs:A (auth: 1), B (auth: 2)
Chain Length:218
Number of Molecules:2
Biological Source:Synechococcus elongatus (strain PCC 7942 / FACHB-805)
Polymer Type:polypeptide(L)
Description:Carboxysome assembly protein CcmN
Chain IDs:C (auth: 3), D (auth: 4), E (auth: 5), F
Chain Length:122
Number of Molecules:4
Biological Source:Synechococcus elongatus (strain PCC 7942 / FACHB-805)
Primary Citation
Complex structure reveals CcmM and CcmN form a heterotrimeric adaptor in beta-carboxysome.
Protein Sci. 30 1566 1576 (2021)
PMID: 33928692 DOI: 10.1002/pro.4090

Abstact

Carboxysome is an icosahedral self-assembled microcompartment that sequesters RuBisCO and carbonic anhydrases within a selectively permeable protein shell. The scaffolding proteins, CcmM, and CcmN were proposed to act as adaptors that crosslink the enzymatic core to shell facets. However, the details of interaction pattern remain unknown. Here we obtained a stable heterotrimeric complex of CcmM γ-carbonic anhydrase domain (termed CcmMNT) and CcmN, with a 1:2 stoichiometry, which interacts with the shell proteins CcmO and CcmL in vitro. The 2.9 Å crystal structure of this heterotrimer revealed an asymmetric bundle composed of one CcmMNT and two CcmN subunits, all of which adopt a triangular left-handed β-helical barrel structure. The central CcmN subunit packs against CcmMNT and another CcmN subunit via a wall-to-edge or wall-to-wall pattern, respectively. Together with previous findings, we propose CcmMNT -CcmN functions as an adaptor to facilitate the recruitment of shell proteins and the assembly of intact β-carboxysome.

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