7D3V image
Deposition Date 2020-09-21
Release Date 2021-10-06
Last Version Date 2024-05-15
Entry Detail
PDB ID:
7D3V
Keywords:
DNA BINDING PROTEIN/DNA
Title:
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
SOLUTION NMR
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
7D3V validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA dC->dU-editing enzyme APOBEC-3A
Gene (Uniprot):APOBEC3A
Mutations:L262N, C263S, E271Q, C370Q
Chain IDs:A, B
Chain Length:199
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P31941 Pfam ID:PF05240 EC:3.5.4.38
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3')
Chain IDs:C, D
Chain Length:10
Number of Molecules:2
Biological Source:synthetic construct
Ligand Molecules
ZN
Primary Citation
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3
To Be Published ? ? ? (?)
Primary Citation of related structures
7D3V