7D1L image
Deposition Date 2020-09-14
Release Date 2021-08-25
Last Version Date 2024-10-09
Entry Detail
PDB ID:
7D1L
Keywords:
Title:
complex structure of two RRM domains
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Embryonic developmental protein tofu-6
Gene (Uniprot):tofu-6
Mutations:LEU23MSE
Chain IDs:A, B
Chain Length:94
Number of Molecules:2
Biological Source:Caenorhabditis elegans
Polymer Type:polypeptide(L)
Molecule:Uncharacterized protein
Gene (Uniprot):pid-3
Mutations:ILE233MSE
Chain IDs:C, D
Chain Length:89
Number of Molecules:2
Biological Source:Caenorhabditis elegans
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Primary Citation
Molecular basis for PICS-mediated piRNA biogenesis and cell division.
Nat Commun 12 5595 5595 (2021)
PMID: 34552083 DOI: 10.1038/s41467-021-25896-7

Abstact

By incorporating two mutually exclusive factors, PID-1 and TOST-1, C. elegans PICS complex plays important roles in piRNA biogenesis, chromosome segregation and cell division. We firstly map the interaction network between PICS subunits, then uncover the mechanisms underlying the interactions between PICS subunits by solving several complex structures, including those of TOFU-6/PICS-1, ERH-2/PICS-1, and ERH-2/TOST-1. Our biochemical experiment also demonstrates that PICS exists as an octamer consisting of two copies of each subunit. Combining structural analyses with mutagenesis experiments, we identify interfacial residues of PICS subunits that are critical for maintaining intact PICS complex in vitro. Furthermore, using genetics, cell biology and imaging experiments, we find that those mutants impairing the in vitro interaction network within PICS, also lead to dysfunction of PICS in vivo, including mislocalization of PICS, and reduced levels of piRNAs or aberrant chromosome segregation and cell division. Therefore, our work provides structural insights into understanding the PICS-mediated piRNA biogenesis and cell division.

Legend

Protein

Chemical

Disease

Primary Citation of related structures