7CVZ image
Entry Detail
PDB ID:
7CVZ
EMDB ID:
Title:
Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-263
Biological Source:
PDB Version:
Deposition Date:
2020-08-27
Release Date:
2020-11-04
Method Details:
Experimental Method:
Resolution:
4.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:E1 glycoprotein
Chain IDs:A (auth: D), F (auth: G), H (auth: J), N (auth: A)
Chain Length:439
Number of Molecules:4
Biological Source:Chikungunya virus
Polymer Type:polypeptide(L)
Description:E2 glycoprotein
Chain IDs:B (auth: E), G (auth: H), I (auth: K), O (auth: B)
Chain Length:419
Number of Molecules:4
Biological Source:Chikungunya virus
Polymer Type:polypeptide(L)
Description:Capsid protein
Chain IDs:C (auth: F), J (auth: L), K (auth: I), P (auth: C)
Chain Length:151
Number of Molecules:4
Biological Source:Chikungunya virus
Polymer Type:polypeptide(L)
Description:Fab heavy chain
Chain IDs:D (auth: O), L (auth: Q)
Chain Length:216
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Fab light chain
Chain IDs:E (auth: P), M (auth: R)
Chain Length:213
Number of Molecules:2
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structural basis of Chikungunya virus inhibition by monoclonal antibodies.
Proc.Natl.Acad.Sci.USA 117 27637 27645 (2020)
PMID: 33087569 DOI: 10.1073/pnas.2008051117

Abstact

Chikungunya virus (CHIKV) is an emerging viral pathogen that causes both acute and chronic debilitating arthritis. Here, we describe the functional and structural basis as to how two anti-CHIKV monoclonal antibodies, CHK-124 and CHK-263, potently inhibit CHIKV infection in vitro and in vivo. Our in vitro studies show that CHK-124 and CHK-263 block CHIKV at multiple stages of viral infection. CHK-124 aggregates virus particles and blocks attachment. Also, due to antibody-induced virus aggregation, fusion with endosomes and egress are inhibited. CHK-263 neutralizes CHIKV infection mainly by blocking virus attachment and fusion. To determine the structural basis of neutralization, we generated cryogenic electron microscopy reconstructions of Fab:CHIKV complexes at 4- to 5-Å resolution. CHK-124 binds to the E2 domain B and overlaps with the Mxra8 receptor-binding site. CHK-263 blocks fusion by binding an epitope that spans across E1 and E2 and locks the heterodimer together, likely preventing structural rearrangements required for fusion. These results provide structural insight as to how neutralizing antibody engagement of CHIKV inhibits different stages of the viral life cycle, which could inform vaccine and therapeutic design.

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