7CVQ image
Entry Detail
PDB ID:
7CVQ
Title:
crystal structure of Arabidopsis CO CCT domain in complex with NF-YB2/YC3 and FT CORE1 DNA
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2020-08-26
Release Date:
2021-06-16
Method Details:
Experimental Method:
Resolution:
3.30 Å
R-Value Free:
0.26
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Chimera of Nuclear transcription factor Y subunit C-3 and Zinc finger protein CONSTANS
Chain IDs:A, E (auth: F), F (auth: K), G (auth: P)
Chain Length:174
Number of Molecules:4
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Nuclear transcription factor Y subunit B-2
Chain IDs:B, H (auth: G), I (auth: L), J (auth: Q)
Chain Length:97
Number of Molecules:4
Biological Source:Arabidopsis thaliana
Polymer Type:polydeoxyribonucleotide
Description:FT CORE1 DNA forward strand
Chain IDs:C (auth: D), K (auth: I), L (auth: N), M (auth: T)
Chain Length:25
Number of Molecules:4
Biological Source:Arabidopsis thaliana
Polymer Type:polydeoxyribonucleotide
Description:FT CORE1 DNA reverse strand
Chain IDs:D (auth: E), N (auth: J), O, P (auth: U)
Chain Length:25
Number of Molecules:4
Biological Source:Arabidopsis thaliana
Ligand Molecules
Primary Citation
Structural insights into the multivalent binding of the Arabidopsis FLOWERING LOCUS T promoter by the CO-NF-Y master transcription factor complex.
Plant Cell 33 1182 1195 (2021)
PMID: 33693873 DOI: 10.1093/plcell/koab016

Abstact

Flowering plants sense various environmental and endogenous signals to trigger the floral transition and start the reproductive growth cycle. CONSTANS (CO) is a master transcription factor in the photoperiod floral pathway that integrates upstream signals and activates the florigen gene FLOWERING LOCUS T (FT). Here, we performed comprehensive structural and biochemical analyses to study the molecular mechanism underlying the regulation of FT by CO in Arabidopsis thaliana. We show that the four previously characterized cis-elements in the FT promoter proximal region, CORE1, CORE2, P1, and P2, are all direct CO binding sites. Structural analysis of CO in complex with NUCLEAR FACTOR-YB/YC (NF-YB/YC) and the CORE2 or CORE1 elements revealed the molecular basis for the specific recognition of the shared TGTG motifs. Biochemical analysis suggested that CO might form a homomultimeric assembly via its N-terminal B-Box domain and simultaneously occupy multiple cis-elements within the FT promoter. We suggest that this multivalent binding gives the CO-NF-Y complex high affinity and specificity for FT promoter binding. Overall, our data provide a detailed molecular model for the regulation of FT by the master transcription factor complex CO-NF-Y during the floral transition.

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