7CMZ image
Deposition Date 2020-07-29
Release Date 2021-03-17
Last Version Date 2024-10-30
Entry Detail
PDB ID:
7CMZ
Title:
Crystal Structure of BRCT7/8 in Complex with the APS Motif of PHF8
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA topoisomerase 2-binding protein 1
Gene (Uniprot):TOPBP1
Chain IDs:A
Chain Length:230
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone lysine demethylase PHF8
Gene (Uniprot):PHF8
Chain IDs:B
Chain Length:22
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
PHF8-promoted TOPBP1 demethylation drives ATR activation and preserves genome stability.
Sci Adv 7 ? ? (2021)
PMID: 33952527 DOI: 10.1126/sciadv.abf7684

Abstact

The checkpoint kinase ATR [ATM (ataxia-telangiectasia mutated) and rad3-related] is a master regulator of DNA damage response. Yet, how ATR activity is regulated remains to be investigated. We report here that histone demethylase PHF8 (plant homeodomain finger protein 8) plays a key role in ATR activation and replication stress response. Mechanistically, PHF8 interacts with and demethylates TOPBP1 (DNA topoisomerase 2-binding protein 1), an essential allosteric activator of ATR, under unperturbed conditions, but replication stress results in PHF8 phosphorylation and dissociation from TOPBP1. Consequently, hypomethylated TOPBP1 facilitates RAD9 (RADiation sensitive 9) binding and chromatin loading of the TOPBP1-RAD9 complex to fully activate ATR and thus safeguard the genome and protect cells against replication stress. Our study uncovers a demethylation and phosphorylation code that controls the assembly of TOPBP1-scaffolded protein complex, and provides molecular insight into non-histone methylation switch in ATR activation.

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