7CK6 image
Deposition Date 2020-07-15
Release Date 2020-11-04
Last Version Date 2024-03-27
Entry Detail
PDB ID:
7CK6
Title:
Protein translocase of mitochondria
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Mitochondrial import receptor subunit TOM40 homolog
Gene (Uniprot):TOMM40
Chain IDs:A, B
Chain Length:361
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Mitochondrial import receptor subunit TOM22 homolog
Gene (Uniprot):TOMM22
Chain IDs:C, D
Chain Length:142
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Mitochondrial import receptor subunit TOM6 homolog
Gene (Uniprot):TOMM6
Chain IDs:E, F
Chain Length:74
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Mitochondrial import receptor subunit TOM7 homolog
Gene (Uniprot):TOMM7
Chain IDs:G, H
Chain Length:55
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Mitochondrial import receptor subunit TOM5 homolog
Gene (Uniprot):TOMM5
Chain IDs:I, J
Chain Length:51
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Atomic structure of human TOM core complex.
Cell Discov 6 67 67 (2020)
PMID: 33083003 DOI: 10.1038/s41421-020-00198-2

Abstact

The translocase of the outer mitochondrial membrane (TOM) complex is the main entry gate for mitochondrial precursor proteins synthesized on cytosolic ribosomes. Here we report the single-particle cryo-electron microscopy (cryo-EM) structure of the dimeric human TOM core complex (TOM-CC). Two Tom40 β-barrel proteins, connected by two Tom22 receptor subunits and one phospholipid, form the protein-conducting channels. The small Tom proteins Tom5, Tom6, and Tom7 surround the channel and have notable configurations. The distinct electrostatic features of the complex, including the pronounced negative interior and the positive regions at the periphery and center of the dimer on the intermembrane space (IMS) side, provide insight into the preprotein translocation mechanism. Further, two dimeric TOM complexes may associate to form tetramer in the shape of a parallelogram, offering a potential explanation into the unusual structural features of Tom subunits and a new perspective of viewing the import of mitochondrial proteins.

Legend

Protein

Chemical

Disease

Primary Citation of related structures