7CCG image
Deposition Date 2020-06-17
Release Date 2020-09-09
Last Version Date 2023-11-29
Entry Detail
PDB ID:
7CCG
Keywords:
Title:
Crystal structure of ClA1, a kind of a chlorinase from soil bacteria
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.85 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
H 3
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase subunit delta
Gene (Uniprot):SALB_08549, SALB_08560
Chain IDs:A
Chain Length:271
Number of Molecules:1
Biological Source:Streptomyces albulus
Primary Citation
Crystal structure of ClA1, a type of chlorinase from soil bacteria.
Biochem.Biophys.Res.Commun. 530 42 46 (2020)
PMID: 32828313 DOI: 10.1016/j.bbrc.2020.06.129

Abstact

Halogenated compounds are widely discovered in nature, and many of them exhibit biological activities, such as an important chlorinated natural product salinosporamide A serving as a potential anticancer agent. Compared with bromination, iodination and fluorination, chlorination is the mainly important modification. To shed light on the mechanism of SAM-dependent chlorinases, a recombinant chlorinase ClA1 was expressed in Escherichia coli and further purified for crystallization and X-ray diffraction experiments. The flake crystals of ClA1 were able to diffract to a resolution of 1.85 Å. The crystals belonged to space group R3, with unit-cell parameters α = β = 90.0°, γ = 120.0°. By determining the structure of ClA1, it is revealed that the side chain of Arg242 in ClA1 may have contacts with the L-Met. However, in SalL the equivalent Arg243's side chain is far from L-Met. Considering the ClA1 and SalL are from different environments and their enzyme kinetics are quite different, it is suggested that the side chain conformation differences of the conserved arginine are possibly related with the enzyme activity differences of the two chlorinases.

Legend

Protein

Chemical

Disease

Primary Citation of related structures