7CCB image
Deposition Date 2020-06-16
Release Date 2020-10-14
Last Version Date 2023-11-29
Entry Detail
PDB ID:
7CCB
Title:
Crystal structure of the SPRY domain-containing protein 7 (SPRY7)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.62 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SPRY domain-containing protein 7
Gene (Uniprot):SPRYD7
Chain IDs:A, B
Chain Length:184
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Crystal structure of the SPRY domain-containing protein 7 reveals unique structural features.
Biochem.Biophys.Res.Commun. 531 350 356 (2020)
PMID: 32800543 DOI: 10.1016/j.bbrc.2020.07.076

Abstact

The SPRY/B30.2 domain is one of the most abundant protein domains found in eukaryotes. Vast majority of the SPRY domain-containing proteins are multi-domain proteins. The SPRY domain-containing protein 7 (SPRY7, also named C13orf1, and named chronic lymphocytic leukemia deletion region gene 6 protein, CCLD6, encoded by the spryd7 gene) is the smallest SPRY domain protein in human that does not contain other accessory domains. Here we have determined the crystal structure of human SPRY7 at a resolution of 1.62 Å and found that SPRY7 has some unique structural features that are not present in other previously reported SRPY domain structures. Overall, SPRY7 may represent an evolutionary early version of the SPRY domain, and subsequent loop insertions and expansions, residue substitutions, as well as domain combinations have rendered the SPRY domain versatile binding specificities and broad biological functions. These results serve as a useful basis for a profound characterization of the molecular interactions of SPRY7.

Legend

Protein

Chemical

Disease

Primary Citation of related structures