7CC3 image
Entry Detail
PDB ID:
7CC3
Keywords:
Title:
Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: co-FG)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2020-06-16
Release Date:
2021-04-28
Method Details:
Experimental Method:
Resolution:
1.72 Å
R-Value Free:
0.21
R-Value Work:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:cis-prenyltransferase MM_0014
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:224
Number of Molecules:8
Biological Source:Methanosarcina mazei Go1
Primary Citation
A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.
J.Biol.Chem. 296 100679 100679 (2021)
PMID: 33872599 DOI: 10.1016/j.jbc.2021.100679

Abstact

Polyprenyl groups, products of isoprenoid metabolism, are utilized in peptidoglycan biosynthesis, protein N-glycosylation, and other processes. These groups are formed by cis-prenyltransferases, which use allylic prenyl pyrophosphates as prenyl-donors to catalyze the C-prenylation of the general acceptor substrate, isopentenyl pyrophosphate. Repetition of this reaction forms (Z,E-mixed)-polyprenyl pyrophosphates, which are converted later into glycosyl carrier lipids, such as undecaprenyl phosphate and dolichyl phosphate. MM_0014 from the methanogenic archaeon Methanosarcina mazei is known as a versatile cis-prenyltransferase that accepts both isopentenyl pyrophosphate and dimethylallyl pyrophosphate as acceptor substrates. To learn more about this enzyme's catalytic activity, we determined the X-ray crystal structures of MM_0014 in the presence or absence of these substrates. Surprisingly, one structure revealed a complex with O-prenylglycerol, suggesting that the enzyme catalyzed the prenylation of glycerol contained in the crystallization buffer. Further analyses confirmed that the enzyme could catalyze the O-prenylation of small alcohols, such as 2-propanol, expanding our understanding of the catalytic ability of cis-prenyltransferases.

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