7CB5 image
Entry Detail
PDB ID:
7CB5
Title:
The 6-phosphogluconate dehydrogenase from Staphylococcus aureus (6-phosphogluconate bound)
Biological Source:
PDB Version:
Deposition Date:
2020-06-10
Release Date:
2021-04-07
Method Details:
Experimental Method:
Resolution:
2.54 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:6-phosphogluconate dehydrogenase, decarboxylating
Chain IDs:A, B, C, D
Chain Length:468
Number of Molecules:4
Biological Source:Staphylococcus aureus (strain Newman)
Ligand Molecules
Primary Citation
Multi-target mode of action of silver against Staphylococcus aureus endows it with capability to combat antibiotic resistance.
Nat Commun 12 3331 3331 (2021)
PMID: 34099682 DOI: 10.1038/s41467-021-23659-y

Abstact

The rapid emergence of drug resistant Staphylococcus aureus (S. aureus) poses a serious threat to public health globally. Silver (Ag)-based antimicrobials are promising to combat antibiotic resistant S. aureus, yet their molecular targets are largely elusive. Herein, we separate and identify 38 authentic Ag+-binding proteins in S. aureus at the whole-cell scale. We then capture the molecular snapshot on the dynamic action of Ag+ against S. aureus and further validate that Ag+ could inhibit a key target 6-phosphogluconate dehydrogenase through binding to catalytic His185 by X-ray crystallography. Significantly, the multi-target mode of action of Ag+ (and nanosilver) endows its sustainable antimicrobial efficacy, leading to enhanced efficacy of conventional antibiotics and resensitization of MRSA to antibiotics. Our study resolves the long-standing question of the molecular targets of silver in S. aureus and offers insights into the sustainable bacterial susceptibility of silver, providing a potential approach for combating antimicrobial resistance.

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Primary Citation of related structures