ISDA

Entry Detail

PDB ID:

7C4J

EMDB ID:

EMD-30285

Keywords:

DNA BINDING PROTEIN

Title:

Cryo-EM structure of the yeast Swi/Snf complex in a nucleosome free state

Biological Source:

Source Organism:

Saccharomyces cerevisiae S288C

PDB Version:

Deposition Date:

2020-05-18

Release Date:

2020-07-15

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.89 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Transcription regulatory protein SNF12
Chain IDs:A
Chain Length:566
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P53628

Protein Blast

Polymer Type:polypeptide(L)
Description:SWI/SNF complex subunit SWI3
Chain IDs:B, D
Chain Length:825
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P32591 Pfam ID:PF04433, PF00249, PF16495

Protein Blast

Polymer Type:polypeptide(L)
Description:Transcription regulatory protein SNF6
Chain IDs:C
Chain Length:332
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P18888

Protein Blast

Polymer Type:polypeptide(L)
Description:SWI/SNF global transcription activator complex subunit SWP82
Chain IDs:E
Chain Length:623
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P43554 Pfam ID:PF08624

Protein Blast

Polymer Type:polypeptide(L)
Description:SWI/SNF chromatin-remodeling complex subunit SNF5
Chain IDs:F
Chain Length:905
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P18480 Pfam ID:PF04855

Polymer Type:polypeptide(L)
Description:Unkown
Chain IDs:I (auth: G)
Chain Length:82
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

Protein Blast

Polymer Type:polypeptide(L)
Description:Transcription regulatory protein SNF2
Chain IDs:G (auth: H)
Chain Length:1703
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P22082 Pfam ID:PF08880, PF00176, PF00271, PF14619, PF00439

Protein Blast

Polymer Type:polypeptide(L)
Description:SWI/SNF chromatin-remodeling complex subunit SWI1
Chain IDs:H (auth: I)
Chain Length:1314
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P09547 Pfam ID:PF01388

Protein Blast

Polymer Type:polypeptide(L)
Description:Regulator of Ty1 transposition protein 102
Chain IDs:J
Chain Length:157
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:P53330 Pfam ID:PF09510

Protein Blast

Polymer Type:polypeptide(L)
Description:Actin-related protein 7
Chain IDs:K
Chain Length:477
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:Q12406 Pfam ID:PF00022

Protein Blast

Polymer Type:polypeptide(L)
Description:Actin-like protein ARP9
Chain IDs:L
Chain Length:467
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C

UniProt ID:Q05123 Pfam ID:PF00022

Ligand Molecules

Primary Citation

Structure of the yeast Swi/Snf complex in a nucleosome free state

Wang, C.C, Guo, Z.Y, Zhan, X.C, Yang, F.H, Wu, M.X, Zhang, X.F.Show

Nat Commun ? ? ? (2020)

Primary Citation of related structures