7C3M image
Deposition Date 2020-05-13
Release Date 2020-06-03
Last Version Date 2024-03-27
Entry Detail
PDB ID:
7C3M
Title:
Structure of FERM protein
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.60 Å
R-Value Free:
0.31
R-Value Work:
0.30
R-Value Observed:
0.30
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Fermitin family homolog 3,Fermitin family homolog 3,Fermitin family homolog 3
Gene (Uniprot):FERMT3
Chain IDs:A, B, C
Chain Length:675
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis of human full-length kindlin-3 homotrimer in an auto-inhibited state.
Plos Biol. 18 e3000755 e3000755 (2020)
PMID: 32644996 DOI: 10.1371/journal.pbio.3000755

Abstact

Kindlin-1, -2, and -3 directly bind integrin β cytoplasmic tails to regulate integrin activation and signaling. Despite their functional significance and links to several diseases, structural information on full-length kindlin proteins remains unknown. Here, we report the crystal structure of human full-length kindlin-3, which reveals a novel homotrimer state. Unlike kindlin-3 monomer, which is the major population in insect and mammalian cell expression systems, kindlin-3 trimer does not bind integrin β cytoplasmic tail as the integrin-binding pocket in the F3 subdomain of 1 protomer is occluded by the pleckstrin homology (PH) domain of another protomer, suggesting that kindlin-3 is auto-inhibited upon trimer formation. This is also supported by functional assays in which kindlin-3 knockout K562 erythroleukemia cells reconstituted with the mutant kindlin-3 containing trimer-disrupting mutations exhibited an increase in integrin-mediated adhesion and spreading on fibronectin compared with those reconstituted with wild-type kindlin-3. Taken together, our findings reveal a novel mechanism of kindlin auto-inhibition that involves its homotrimer formation.

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Primary Citation of related structures