7C31 image
Deposition Date 2020-05-10
Release Date 2020-09-16
Last Version Date 2024-10-16
Entry Detail
PDB ID:
7C31
Title:
Crystal structure of the grapevine defensin VvK1
Biological Source:
Source Organism:
Vitis vinifera (Taxon ID: 29760)
Method Details:
Experimental Method:
Resolution:
1.30 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 43
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Knot1 domain-containing protein
Gene (Uniprot):VIT_07s0130g00030
Chain IDs:A, B
Chain Length:47
Number of Molecules:2
Biological Source:Vitis vinifera
Primary Citation
Modulation of Lymphocyte Potassium Channel KV1.3 by Membrane-Penetrating, Joint-Targeting Immunomodulatory Plant Defensin.
Acs Pharmacol Transl Sci 3 720 736 (2020)
PMID: 32832873 DOI: 10.1021/acsptsci.0c00035

Abstact

We describe a cysteine-rich, membrane-penetrating, joint-targeting, and remarkably stable peptide, EgK5, that modulates voltage-gated KV1.3 potassium channels in T lymphocytes by a distinctive mechanism. EgK5 enters plasma membranes and binds to KV1.3, causing current run-down by a phosphatidylinositol 4,5-bisphosphate-dependent mechanism. EgK5 exhibits selectivity for KV1.3 over other channels, receptors, transporters, and enzymes. EgK5 suppresses antigen-triggered proliferation of effector memory T cells, a subset enriched among pathogenic autoreactive T cells in autoimmune disease. PET-CT imaging with 18F-labeled EgK5 shows accumulation of the peptide in large and small joints of rodents. In keeping with its arthrotropism, EgK5 treats disease in a rat model of rheumatoid arthritis. It was also effective in treating disease in a rat model of atopic dermatitis. No signs of toxicity are observed at 10-100 times the in vivo dose. EgK5 shows promise for clinical development as a therapeutic for autoimmune diseases.

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Primary Citation of related structures
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